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Home: Perl Programming Help: Intermediate:
problem with writing cluster program

 



mrteja86
New User

Sep 28, 2010, 11:27 AM

Post #1 of 1 (576 views)
problem with writing cluster program Can't Post

hi everyone,

I am trying to write a prog for average linkage clustering algorithm for microarray data. i started up by writing a program from scratch for single linkage clustering and tried to reuse some parts of the code for average linkage but the whole thing is messing up.

I was searching and found out algorithm::cluster module. I am having a hard time installing it as it does not show up on perl ppm. did anybody use it and is it any good?

if anybody has any idea of average linkage clustering could you please give me a message so that i could discuss my logic with you as the logic seems fine on papaer and but seems to go haywire on implementation.



I am not that new to perl but still seem to have a few issues with my basics so please do help me.

thanks all.


PS:i am attaching my code file if you would like to have a look at it.
Attachments: cluster_avg_fin.pl (12.6 KB)

 
 


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